CDS

Accession Number TCMCG057C26308
gbkey CDS
Protein Id XP_018485479.1
Location complement(join(27956706..27956928,27957003..27957127,27957327..27957375,27957466..27957623,27957719..27957805,27958102..27958246,27958409..27958472,27958602..27958800,27959129..27959338))
Gene LOC108856214
GeneID 108856214
Organism Raphanus sativus

Protein

Length 419aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018629977.1
Definition PREDICTED: diphosphomevalonate decarboxylase MVD2-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids
KEGG_TC -
KEGG_Module M00095        [VIEW IN KEGG]
KEGG_Reaction R01121        [VIEW IN KEGG]
KEGG_rclass RC00453        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01597        [VIEW IN KEGG]
EC 4.1.1.33        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004163        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006084        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006487        [VIEW IN EMBL-EBI]
GO:0006488        [VIEW IN EMBL-EBI]
GO:0006489        [VIEW IN EMBL-EBI]
GO:0006490        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006637        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006694        [VIEW IN EMBL-EBI]
GO:0006695        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008203        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016125        [VIEW IN EMBL-EBI]
GO:0016126        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016830        [VIEW IN EMBL-EBI]
GO:0016831        [VIEW IN EMBL-EBI]
GO:0019216        [VIEW IN EMBL-EBI]
GO:0019218        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019287        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0030544        [VIEW IN EMBL-EBI]
GO:0031072        [VIEW IN EMBL-EBI]
GO:0033865        [VIEW IN EMBL-EBI]
GO:0033875        [VIEW IN EMBL-EBI]
GO:0034032        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035383        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045540        [VIEW IN EMBL-EBI]
GO:0046165        [VIEW IN EMBL-EBI]
GO:0046465        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0046890        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050810        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0062012        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090181        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0106118        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]
GO:1902652        [VIEW IN EMBL-EBI]
GO:1902653        [VIEW IN EMBL-EBI]
GO:1902930        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGGAGAAATGGGTGCACACGGTGACGGCTCAAACTCCGACGAACATCGCGGTGATTAAGTATTGGGGAAAGAGAGACGAGGTCCGGATCCTCCCCGTAAACGACAGCATCAGCGTAACTCTCGATCCCGATCACCTCTGCACCGTCACCACCGTCGCCGTCAGTCCCGCTTTCGATCGGGATCGAATGTGGCTCAACGGCAAGGAGATCTCTCTATCGGGGAGTAGGTACCAGAACTGTTTGAGGGAGATTCGAAGCCGTGGTGGTGATGTCGAAGACAAGGAGAAAGGTGTGAAGATTGAGAAGAAAGATTGGGAGAGATTGAATCTGCATATTGCTTCTCATAACAACTTCCCTACAGCTGCTGGTTTAGCTTCTTCAGCTGCTGGATTTGCTTGTCTAGTTTTCTCTCTTGCAAAGTTGATGAATGTAGAGGAAGATCTAAGCCAGCTTTCTGCGATAGCCAGGCAAGGTTCAGGAAGTGCTTGCCGTAGTTTGTTTGGTGGATTTGTCAAGTGGAAAATGGGAAGCAAAGAAGATGGAAGTGATAGCGTTGCAGTTCAACTTGCAGATGAGAAGCATTGGGATGATCTTGTTATCATCATTGCTGTGGTAAGTTCACGGCAGAAGGAAACGAGCAGCACCTCTGGAATGCGAGAAAGTGTTGAGACGAGTTTGCTTTTACAGCACAGAGCAAAAGAAGTTGTGCCGAAACGGATTGTGCAAATGGAGGAAGCTATTAAAAACCAAGATTTTGCATCGTTTACCCAACTGAGCTGCACAGACAGTAACCAGTTCCATGCTGTTTGTCTAGATACATCTCCACCCATATTTTACATGAATGACACCTCCCACAGGATAATTAGCTTAGTTGAAAAGTGGAACCGTTCTGAAGGGACTCCACAGGTTGCTTACACATTTGATGCTGGTCCAAATGCTGTACTGATTGCACGCAACAGAAAGGTAGCTGTTCAACTTCTCCAGGGGCTTCTCTACTATTTCCCTCCTAAGTCTGACACTGATATGAAGAGTTACGTAGTGGGAGACAATTCGATTCTAAAGGAGGCAGGATTAGAGGGAGCAAAGAGTGTTGAGAATCTGCAACCTCCACCTGAAATGAAAGACAAGATTGGATCTCAGGATCAAAAAGGAGAAGTCAGTTATTTTATATGCACTAGACCTGGAAGAGGTCCCGTCGTGCTTCCCGACCAGACTCAAGCTCTTCTCGATCCGGTAACCGGCCTTCCCAAATGA
Protein:  
MAAEKWVHTVTAQTPTNIAVIKYWGKRDEVRILPVNDSISVTLDPDHLCTVTTVAVSPAFDRDRMWLNGKEISLSGSRYQNCLREIRSRGGDVEDKEKGVKIEKKDWERLNLHIASHNNFPTAAGLASSAAGFACLVFSLAKLMNVEEDLSQLSAIARQGSGSACRSLFGGFVKWKMGSKEDGSDSVAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPKRIVQMEEAIKNQDFASFTQLSCTDSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIARNRKVAVQLLQGLLYYFPPKSDTDMKSYVVGDNSILKEAGLEGAKSVENLQPPPEMKDKIGSQDQKGEVSYFICTRPGRGPVVLPDQTQALLDPVTGLPK